You will then need to deposit the payments into your bank account via Accounts > Bank Deposits.
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You cannot used unbanked funds, so you need to ensure this is not ticked in Tools > Options > Banking.
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The process to transfer the payments from Bank Deposits to your bank account is as per a normal banking session except you need to select Not Banked Direct Debit to see the payments.
Further information:
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Electronic Payments Direct Debit Setup Create an Electronic Payments Session Electronic Payments – Direct Debit Electronic Payments Batch Invoice using Direct Debit Payments |